Bioinformatician

Manage the development and operation of biology data analysis pipelines for next-generation sequencing, focusing on large datasets and implementing new methods for exploring DNA-related clinical samples, including FFPE, fresh tissues, and cell-free DNA from plasma

Optimize and maintain analysis pipelines for large-scale samples

Oversee database systems, contributing to the development and improvement of methods for identifying and interpreting biomarkers for therapeutic and diagnostic purposes in cancer and inherited diseases

Troubleshoot and support other teams in resolving problems and ensuring data quality control

Summarize analysis results in suitable formats for colleagues and collaborators

Contribute to team discussions, support broader research goals, and potentially aid in the creation of publications

Provide weekly reports to the line manager

Proven experience in working with short read sequencing from NGS platform

Deep knowledge in domains such as cancer biology, human genetics, and molecular biology

Solid experience in analyzing DNA-seq, RNA-seq, or Methyl-seq

Familiarity with bioinformatics pipeline on high-performance computing environments

Strong attention to detail and adept at organizing multiple priorities efficiently

Ability to collaborate with partners and develop effective communication strategies

Proficient in writing project reports, research protocols, and manuscripts

Capable of independently resolving conflicts

Experience in handling challenging clinical specimens, such as FFPE tumor samples and cell-free DNA from plasma

Familiarity with Nextflow or Snakemake

Proficiency in developing containerized pipelines and environment using Docker, Singularity

Advanced skills in R or Python workflows for analysis and visualization

Basic knowledge of or willingness to learn machine learning and/or deep learning

Familiarity with database and/or MLOps

PhD or Master's degree in Biological Sciences (e.g., molecular biology, genomics, bioinformatics, health science) or

At least 5 years of work experience in an equivalent field

Additional month's salary

Supportive and collaborative work environment with annual trips

Opportunity to apply data analysis skills

Supportive working environment with passionate colleagues to grow and learn

Chance to contribute to a company making a positive impact in the region

Competitive compensation package including health insurance and flexible working hours

PEGASI – IT Recruitment Consultancy | Email: recruit@pegasi.com.vn | Tel: +84 28 3622 8666